5ZCR image
Entry Detail
PDB ID:
5ZCR
Keywords:
Title:
DSM5389 glycosyltrehalose synthase
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-02-20
Release Date:
2018-11-21
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Maltooligosyl trehalose synthase
Mutations:D22N, H54D
Chain IDs:A, B
Chain Length:728
Number of Molecules:2
Biological Source:Sulfolobus shibatae B12
Primary Citation
Crystal structure of glycosyltrehalose synthase from Sulfolobus shibatae DSM5389
Acta Crystallogr F Struct Biol Commun 74 741 746 (2018)
PMID: 30387780 DOI: 10.1107/S2053230X1801453X

Abstact

Glycosyltrehalose synthase (GTSase) converts the glucosidic bond between the last two glucose residues of amylose from an α-1,4 bond to an α-1,1 bond, generating a nonreducing glycosyl trehaloside, in the first step of the biosynthesis of trehalose. To better understand the structural basis of the catalytic mechanism, the crystal structure of GTSase from the hyperthermophilic archaeon Sulfolobus shibatae DSM5389 (5389-GTSase) has been determined to 2.4 Å resolution by X-ray crystallography. The structure of 5389-GTSase can be divided into five domains. The central domain contains the (β/α)8-barrel fold that is conserved as the catalytic domain in the α-amylase family. Three invariant catalytic carboxylic amino acids in the α-amylase family are also found in GTSase at positions Asp241, Glu269 and Asp460 in the catalytic domain. The shape of the catalytic cavity and the pocket size at the bottom of the cavity correspond to the intramolecular transglycosylation mechanism proposed from previous enzymatic studies.

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