5ZAZ image
Deposition Date 2018-02-09
Release Date 2018-10-17
Last Version Date 2024-05-15
Entry Detail
PDB ID:
5ZAZ
Keywords:
Title:
Solution structure of integrin b2 monomer tranmembrane domain in bicelle
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin beta-2
Gene (Uniprot):ITGB2
Mutagens:C695S
Chain IDs:A
Chain Length:52
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Intramembrane ionic protein-lipid interaction regulates integrin structure and function.
PLoS Biol. 16 e2006525 e2006525 (2018)
PMID: 30427828 DOI: 10.1371/journal.pbio.2006525

Abstact

Protein transmembrane domains (TMDs) are generally hydrophobic, but our bioinformatics analysis shows that many TMDs contain basic residues at terminal regions. Physiological functions of these membrane-snorkeling basic residues are largely unclear. Here, we show that a membrane-snorkeling Lys residue in integrin αLβ2 (also known as lymphocyte function-associated antigen 1 [LFA-1]) regulates transmembrane heterodimer formation and integrin adhesion through ionic interplay with acidic phospholipids and calcium ions (Ca2+) in T cells. The amino group of the conserved Lys ionically interacts with the phosphate group of acidic phospholipids to stabilize αLβ2 transmembrane association, thus keeping the integrin at low-affinity conformation. Intracellular Ca2+ uses its charge to directly disrupt this ionic interaction, leading to the transmembrane separation and the subsequent extracellular domain extension to increase adhesion activity. This Ca2+-mediated regulation is independent on the canonical Ca2+ signaling or integrin inside-out signaling. Our work therefore showcases the importance of intramembrane ionic protein-lipid interaction and provides a new mechanism of integrin activation.

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