5ZAL image
Entry Detail
PDB ID:
5ZAL
EMDB ID:
Title:
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2018-02-07
Release Date:
2018-05-09
Method Details:
Experimental Method:
Resolution:
4.70 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Endoribonuclease Dicer
Chain IDs:A
Chain Length:1922
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:RISC-loading complex subunit TARBP2
Chain IDs:B
Chain Length:366
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polyribonucleotide
Description:RNA (73-mer)
Chain IDs:C
Chain Length:73
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell 173 1191 1203.e12 (2018)
PMID: 29706542 DOI: 10.1016/j.cell.2018.03.080

Abstact

Human Dicer (hDicer) is a multi-domain protein belonging to the RNase III family. It plays pivotal roles in small RNA biogenesis during the RNA interference (RNAi) pathway by processing a diverse range of double-stranded RNA (dsRNA) precursors to generate ∼22 nt microRNA (miRNA) or small interfering RNA (siRNA) products for sequence-directed gene silencing. In this work, we solved the cryoelectron microscopy (cryo-EM) structure of hDicer in complex with its cofactor protein TRBP and revealed the precise spatial arrangement of hDicer's multiple domains. We further solved structures of the hDicer-TRBP complex bound with pre-let-7 RNA in two distinct conformations. In combination with biochemical analysis, these structures reveal a property of the hDicer-TRBP complex to promote the stability of pre-miRNA's stem duplex in a pre-dicing state. These results provide insights into the mechanism of RNA processing by hDicer and illustrate the regulatory role of hDicer's N-terminal helicase domain.

Legend

Protein

Chemical

Disease

Primary Citation of related structures