5Z73 image
Deposition Date 2018-01-27
Release Date 2018-05-30
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5Z73
Keywords:
Title:
Crystal structure of alkaline/neutral invertase InvB from Anabaena sp. PCC 7120
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.93 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Alr0819 protein
Gene (Uniprot):invB
Chain IDs:A, B
Chain Length:457
Number of Molecules:2
Biological Source:Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET modified residue
Ligand Molecules
Primary Citation
Structural and enzymatic analyses of Anabaena heterocyst-specific alkaline invertase InvB.
FEBS Lett. 592 1589 1601 (2018)
PMID: 29578606 DOI: 10.1002/1873-3468.13041

Abstact

Anabaena sp. PCC 7120 encodes two alkaline/neutral invertases, namely InvA and InvB. Following our recently reported InvA structure, here we report the crystal structure of the heterocyst-specific InvB. Despite sharing an overall structure similar to InvA, InvB possesses a much higher catalytic activity. Structural comparisons of the catalytic pockets reveal that Arg430 of InvB adopts a different conformation, which may facilitate the deprotonation of the catalytic residue Glu415. We propose that the higher activity may be responsible for the vital role of InvB in heterocyst development and nitrogen fixation. Furthermore, phylogenetic analysis combined with activity assays also suggests the role of this highly conserved arginine in plants and cyanobacteria, as well as some proteobacteria living in highly extreme environments.

Legend

Protein

Chemical

Disease

Primary Citation of related structures