5Z2S image
Deposition Date 2018-01-03
Release Date 2018-04-04
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5Z2S
Title:
Crystal structure of DUX4-HD2 domain
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.50 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Double homeobox protein 4
Gene (Uniprot):DUX4
Chain IDs:A
Chain Length:55
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural basis of DUX4/IGH-driven transactivation.
Leukemia 32 1466 1476 (2018)
PMID: 29572508 DOI: 10.1038/s41375-018-0093-1

Abstact

Oncogenic fusions are major drivers in leukemogenesis and may serve as potent targets for treatment. DUX4/IGHs have been shown to trigger the abnormal expression of ERGalt through binding to DUX4-Responsive-Element (DRE), which leads to B-cell differentiation arrest and a full-fledged B-ALL. Here, we determined the crystal structures of Apo- and DNADRE-bound DUX4HD2 and revealed a clamp-like transactivation mechanism via the double homeobox domain. Biophysical characterization showed that mutations in the interacting interfaces significantly impaired the DNA binding affinity of DUX4 homeobox. These mutations, when introduced into DUX4/IGH, abrogated its transactivation activity in Reh cells. More importantly, the structure-based mutants significantly impaired the inhibitory effects of DUX4/IGH upon B-cell differentiation in mouse progenitor cells. All these results help to define a key DUX4/IGH-DRE recognition/step in B-ALL.

Legend

Protein

Chemical

Disease

Primary Citation of related structures