5Z1L image
Entry Detail
PDB ID:
5Z1L
EMDB ID:
Keywords:
Title:
Cryo-EM structure of Methanoccus maripaludis archaellum
Biological Source:
PDB Version:
Deposition Date:
2017-12-26
Release Date:
2019-02-13
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Flagellin
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R
Chain Length:211
Number of Molecules:18
Biological Source:Methanococcus maripaludis (strain S2 / LL)
Ligand Molecules
Primary Citation
High-resolution archaellum structure reveals a conserved metal-binding site.
Embo Rep. 20 ? ? (2019)
PMID: 30898768 DOI: 10.15252/embr.201846340

Abstact

Many archaea swim by means of archaella. While the archaellum is similar in function to its bacterial counterpart, its structure, composition, and evolution are fundamentally different. Archaella are related to archaeal and bacterial type IV pili. Despite recent advances, our understanding of molecular processes governing archaellum assembly and stability is still incomplete. Here, we determine the structures of Methanococcus archaella by X-ray crystallography and cryo-EM The crystal structure of Methanocaldococcus jannaschii FlaB1 is the first and only crystal structure of any archaellin to date at a resolution of 1.5 Å, which is put into biological context by a cryo-EM reconstruction from Methanococcus maripaludis archaella at 4 Å resolution created with helical single-particle analysis. Our results indicate that the archaellum is predominantly composed of FlaB1. We identify N-linked glycosylation by cryo-EM and mass spectrometry. The crystal structure reveals a highly conserved metal-binding site, which is validated by mass spectrometry and electron energy-loss spectroscopy. We show in vitro that the metal-binding site, which appears to be a widespread property of archaellin, is required for filament integrity.

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Primary Citation of related structures