ISDA

Deposition Date 2017-12-25

Release Date 2018-12-12

Last Version Date 2024-03-27

Entry Detail

PDB ID:

5Z1A

Keywords:

HYDROLASE

Title:

The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine

Biological Source:

Source Organism:

Bacteroides fragilis NCTC 9343 (Taxon ID: 272559)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.86 Å

R-Value Free:

0.18

R-Value Work:

0.15

R-Value Observed:

0.15

Space Group:

I 2 2 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Putative beta-galactosidase
Gene (Uniprot):lacZ_4
Chain IDs:A
Chain Length:680
Number of Molecules:1
Biological Source:Bacteroides fragilis NCTC 9343

UniProt ID:Q5LIC7 Pfam ID:PF02837, PF00703, PF02836, PF16355

Ligand Molecules

SJ5

Primary Citation

Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity

Dashnyam, P, Mudududdla, R, Hsieh, T.J, Lin, T.C, Lin, H.Y, Chen, P.Y, Hsu, C.Y, Lin, C.H.Show

To Be Published ? ? ? (?)

Primary Citation of related structures