5YWL image
Deposition Date 2017-11-29
Release Date 2019-03-06
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5YWL
Keywords:
Title:
SsCR_L211H
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein induced by osmotic stress
Gene (Uniprot):GRP3.1
Mutagens:L211H
Chain IDs:A
Chain Length:334
Number of Molecules:1
Biological Source:Scheffersomyces stipitis CBS 6054
Primary Citation
Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol. 308 141 147 (2020)
PMID: 31866427 DOI: 10.1016/j.jbiotec.2019.12.011

Abstact

Substrate inhibition of enzymes is one of the main obstacles encountered frequently in industrial biocatalysis. Haloketone reductase SsCR was seriously inhibited by substrate 2,2',4'-trichloroacetophenone. In this study, two essential loops were found that have a relationship with substrate binding by conducting X-ray crystal structure analysis. Three key residues were selected from the tips of the loops and substituted with amino acids with lower hydrophobicity to weaken the hydrophobic interactions that bridge the two loops, resulting in a remarkable reduction of substrate inhibition. Among these variants, L211H showed a significant attenuation of substrate inhibition, with a Ki of 16 mM, which was 16 times that of the native enzyme. The kinetic parameter kcat/Km of L211H was 3.1 × 103 s-1 mM-1, showing the comparable catalytic efficiency to that of the wild-type enzyme (WT). At the substrate loading of 100 mM, the space time yield of variant L211H in asymmetric reduction of the haloketone was 3-fold higher than that of the WT.

Legend

Protein

Chemical

Disease

Primary Citation of related structures