5YUL image
Entry Detail
PDB ID:
5YUL
Keywords:
Title:
Native Structure of hSOD1 in P6322 space group
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2017-11-22
Release Date:
2018-11-21
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 63 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Superoxide dismutase [Cu-Zn]
Chain IDs:A, B (auth: H), C (auth: B), D (auth: C), E (auth: D), F (auth: E), G (auth: F), H (auth: G), I, J
Chain Length:154
Number of Molecules:10
Biological Source:Homo sapiens
Primary Citation
Assessment of ligand binding at a site relevant to SOD1 oxidation and aggregation
FEBS Lett. 592 1725 1737 (2018)
PMID: 29679384 DOI: 10.1002/1873-3468.13055

Abstact

Cu/Zn superoxide dismutase-1 (SOD1) mutations are causative for a subset of amyotrophic lateral sclerosis (ALS) cases. These mutations lead to structural instability, aggregation and ultimately motor neuron death. We have determined crystal structures of SOD1 in complex with a naphthalene-catechol-linked compound which binds with low micro-molar affinity to a site important for oxidative damage-induced aggregation. SOD1 Trp32 oxidation is indeed significantly inhibited by ligand binding. Our work shows how compound linking can be applied successfully to ligand interactions on the SOD1 surface to generate relatively good binding strength. The ligand, positioned in a region important for SOD1 fibrillation, offers the possibility that it, or a similar compound, could prevent the abnormal self-association that drives SOD1 toxicity in ALS.

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