5YUF image
Deposition Date 2017-11-22
Release Date 2018-04-11
Last Version Date 2024-11-06
Entry Detail
PDB ID:
5YUF
Keywords:
Title:
Crystal Structure of PML RING tetramer
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Protein PML
Gene (Uniprot):PML
Chain IDs:A, B, C, D
Chain Length:51
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
RING tetramerization is required for nuclear body biogenesis and PML sumoylation.
Nat Commun 9 1277 1277 (2018)
PMID: 29599493 DOI: 10.1038/s41467-018-03498-0

Abstact

ProMyelocyticLeukemia nuclear bodies (PML NBs) are stress-regulated domains directly implicated in acute promyelocytic leukemia eradication. Most TRIM family members bind ubiquitin E2s and many acquire ligase activity upon RING dimerization. In contrast, PML binds UBC9, the SUMO E2 enzyme. Here, using X-ray crystallography and SAXS characterization, we demonstrate that PML RING tetramerizes through highly conserved PML-specific sequences, which are required for NB assembly and PML sumoylation. Conserved residues implicated in RING dimerization of other TRIMs also contribute to PML tetramer stability. Wild-type PML rescues the ability of some RING mutants to form NBs as well as their sumoylation. Impaired RING tetramerization abolishes PML/RARA-driven leukemogenesis in vivo and arsenic-induced differentiation ex vivo. Our studies thus identify RING tetramerization as a key step in the NB macro-molecular scaffolding. They suggest that higher order RING interactions allow efficient UBC9 recruitment and thus change the biochemical nature of TRIM-facilitated post-translational modifications.

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