5YUA image
Deposition Date 2017-11-21
Release Date 2017-12-27
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5YUA
Title:
Crystal structure of voltage-gated sodium channel NavAb in high-pH condition
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
I 4 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ion transport protein
Chain IDs:A
Chain Length:271
Number of Molecules:1
Biological Source:Arcobacter butzleri
Primary Citation
Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb.
FEBS Lett. ? ? ? (2017)
PMID: 29274127 DOI: 10.1002/1873-3468.12955

Abstact

Voltage-gated sodium channels are crucial for electro-signalling in living systems. Analysis of the molecular mechanism requires both fine electrophysiological evaluation and high-resolution channel structures. Here, we optimized a dual expression system of NavAb, which is a well-established standard of prokaryotic voltage-gated sodium channels, for E. coli and insect cells using a single plasmid vector to analyse high-resolution protein structures and measure large ionic currents. Using this expression system, we evaluated the voltage dependence and determined the crystal structures of NavAb wild-type and two mutants, E32Q and N49K, whose voltage dependence were positively shifted and essential interactions were lost in voltage sensor domain. The structural and functional comparison elucidated the molecular mechanisms of the voltage dependence of prokaryotic voltage-gated sodium channels.

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