5YSU image
Deposition Date 2017-11-15
Release Date 2018-11-21
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5YSU
Keywords:
TRANSPORT PROTEIN
Title:
Plumbagin in complex with CRM1-RanM189D-RanBP1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Taxon ID: 559292)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 43 21 2
5YSU validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:GTP-binding nuclear protein Ran
Gene (Uniprot):RAN
Mutagens:M189D
Chain IDs:A
Chain Length:216
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P62826 Pfam ID:PF00071
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Ran-specific GTPase-activating protein 1
Gene (Uniprot):YRB1
Chain IDs:B
Chain Length:140
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P41920 Pfam ID:PF00638
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Exportin-1,Exportin-1
Gene (Uniprot):CRM1
Mutagens:D537G,T539C,V540E,K541Q,Y1022C
Chain IDs:C
Chain Length:1024
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
UniProt ID:P30822 Pfam ID:PF03810, PF08389, PF18777, PF18784, PF18787, PF08767
Ligand Molecules
CL
F2X
GTP
MG
NA
NO3
Primary Citation
RanL182A in complex with RanBP1-CRM1
To Be Published ? ? ? (?)
Primary Citation of related structures
5YSU