5YS3 image
Deposition Date 2017-11-13
Release Date 2018-04-25
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5YS3
Title:
1.8 angstrom crystal structure of Succinate-Acetate Permease from Citrobacter koseri
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.82 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 42
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Succinate-Acetate Permease
Gene (Uniprot):CKO_03375
Chain IDs:A, B, C
Chain Length:192
Number of Molecules:3
Biological Source:Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Primary Citation
Succinate-acetate permease from Citrobacter koseri is an anion channel that unidirectionally translocates acetate
Cell Res. 28 644 654 (2018)
PMID: 29588525 DOI: 10.1038/s41422-018-0032-8

Abstact

Acetate is an important metabolite in metabolism and cell signaling. Succinate-Acetate Permease (SatP) superfamily proteins are known to be responsible for acetate transport across membranes, but the nature of this transport remains unknown. Here, we show that the SatP homolog from Citrobacter koseri (SatP_Ck) is an anion channel that can unidirectionally translocate acetate at rates of the order of ~107 ions/s. Crystal structures of SatP_Ck in complex with multiple acetates at 1.8 Å reveal that the acetate pathway consists of four acetate-binding sites aligned in a single file that are interrupted by three hydrophobic constrictions. The bound acetates at the four sites are each orientated differently. The acetate at the cytoplasmic vestibule is partially dehydrated, whereas those in the main pore body are fully dehydrated. Aromatic residues within the substrate pathway may coordinate translocation of acetates via anion-π interactions. SatP_Ck reveals a new type of selective anion channel and provides a structural and functional template for understanding organic anion transport.

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