5YRY image
Deposition Date 2017-11-11
Release Date 2018-11-14
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5YRY
Keywords:
Title:
Crystal structure of C-terminal redox domain of APR1 from Arabidopsis thaliana
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.25
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:5'-adenylylsulfate reductase 1, chloroplastic
Gene (Uniprot):APR1
Chain IDs:A
Chain Length:123
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
C-terminal Redox Domain ofArabidopsisAPR1 is a Non-Canonical Thioredoxin Domain with Glutaredoxin Function.
Antioxidants (Basel) 8 ? ? (2019)
PMID: 31597378 DOI: 10.3390/antiox8100461

Abstact

Sulfur is an essential nutrient that can be converted into utilizable metabolic forms to produce sulfur-containing metabolites in plant. Adenosine 5'-phosphosulfate (APS) reductase (APR) plays a vital role in catalyzing the reduction of activated sulfate to sulfite, which requires glutathione. Previous studies have shown that the C-terminal domain of APR acts as a glutathione-dependent reductase. The crystal structure of the C-terminal redox domain of Arabidopsis APR1 (AtAPR1) shows a conserved α/β thioredoxin fold, but not a glutaredoxin fold. Further biochemical studies of the redox domain from AtAPR1 provided evidence to support the structural observation. Collectively, our results provide structural and biochemical information to explain how the thioredoxin fold exerts the glutaredoxin function in APR.

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