5YOL image
Deposition Date 2017-10-29
Release Date 2017-11-08
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5YOL
Keywords:
TRANSFERASE
Title:
Crystal structure of octameric form of Nucleoside diphosphate kinase from Acinetobacter baumannii at 2.2 A resolution
Biological Source:
Source Organism:
Acinetobacter baumannii (Taxon ID: 470)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1
5YOL validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nucleoside diphosphate kinase
Gene (Uniprot):ndk
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:143
Number of Molecules:8
Biological Source:Acinetobacter baumannii
UniProt ID:V5VIC4 Pfam ID:PF00334 EC:2.7.4.6
Ligand Molecules
MG
Primary Citation
Crystal structure of octameric form of Nucleoside diphosphate kinase from Acinetobacter baumannii at 2.2 A resolution
To Be Published ? ? ? (?)
Primary Citation of related structures
5YOL