5YIG image
Deposition Date 2017-10-04
Release Date 2018-09-05
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5YIG
Title:
Crystal structure of Streptococcus pneumonia ParE with inhibitor
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA topoisomerase 4 subunit B
Chain IDs:A, B
Chain Length:210
Number of Molecules:2
Biological Source:Streptococcus pneumoniae GA47502
Ligand Molecules
Primary Citation
Discovery of dual GyrB/ParE inhibitors active against Gram-negative bacteria.
Eur J Med Chem 157 610 621 (2018)
PMID: 30125722 DOI: 10.1016/j.ejmech.2018.08.025

Abstact

Even though many GyrB and ParE inhibitors have been reported in the literature, few possess activity against Gram-negative bacteria. This is primarily due to limited permeability across Gram-negative bacterial membrane as well as bacterial efflux mechanisms. Permeability of compounds across Gram-negative bacterial membranes depends on many factors including physicochemical properties of the inhibitors. Herein, we show the optimization of pyridylureas leading to compounds with potent activity against Gram-negative bacterial species such as P.aeruginosa, E.coli and A.baumannii.

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Primary Citation of related structures