ISDA: 5YHB

Deposition Date 2017-09-27

Release Date 2017-11-29

Last Version Date 2024-10-30

Entry Detail

PDB ID:

5YHB

Keywords:

VIRAL PROTEIN

Title:

Crystal structure of Pd(allyl)/polyhedra mutant with deletion of Gly192-Ala194

Biological Source:

Source Organism:

Bombyx mori cytoplasmic polyhedrosis virus (Taxon ID: 110829)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.08 Å

R-Value Free:

0.24

R-Value Work:

0.18

R-Value Observed:

0.19

Space Group:

I 2 3

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Polyhedrin
Mutagens:deletion 192-194
Chain IDs:A
Chain Length:245
Number of Molecules:1
Biological Source:Bombyx mori cytoplasmic polyhedrosis virus

UniProt ID:P11041 Pfam ID:PF05865

Ligand Molecules

PLL

Primary Citation

Structure of in cell protein crystals containing organometallic complexes.

Abe, S, Atsumi, K, Yamashita, K, Hirata, K, Mori, H, Ueno, T.Show

Phys Chem Chem Phys 20 2986 2989 (2018)

PMID: 29138769 DOI: 10.1039/c7cp06651a

Abstact

The molecular structures of in cell protein crystals containing organometallic Pd(allyl) complexes were determined by performing microfocus X-ray diffraction experiments. The coordination sites in a polyhedrin mutant with deletion of selected amino acid residues located at the interface of the polyhedrin trimer are dramatically altered compared to those of the wild-type composite.

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Primary Citation of related structures