ISDA

Deposition Date 2017-09-27

Release Date 2017-11-29

Last Version Date 2024-10-09

Entry Detail

PDB ID:

5YHA

Keywords:

VIRAL PROTEIN

Title:

Crystal structure of Pd(allyl)/Wild Type Polyhedra

Biological Source:

Source Organism:

Bombyx mori cytoplasmic polyhedrosis virus (Taxon ID: 110829)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.58 Å

R-Value Free:

0.19

R-Value Work:

0.14

R-Value Observed:

0.15

Space Group:

I 2 3

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Polyhedrin
Chain IDs:A
Chain Length:248
Number of Molecules:1
Biological Source:Bombyx mori cytoplasmic polyhedrosis virus

UniProt ID:P11041 Pfam ID:PF05865

Ligand Molecules

EDO

PLL

Primary Citation

Structure of in cell protein crystals containing organometallic complexes.

Abe, S, Atsumi, K, Yamashita, K, Hirata, K, Mori, H, Ueno, T.Show

Phys Chem Chem Phys 20 2986 2989 (2018)

PMID: 29138769 DOI: 10.1039/c7cp06651a

Abstact

The molecular structures of in cell protein crystals containing organometallic Pd(allyl) complexes were determined by performing microfocus X-ray diffraction experiments. The coordination sites in a polyhedrin mutant with deletion of selected amino acid residues located at the interface of the polyhedrin trimer are dramatically altered compared to those of the wild-type composite.

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Protein

Chemical

Disease

Primary Citation of related structures