ISDA

Deposition Date 2017-09-06

Release Date 2018-10-03

Last Version Date 2024-11-06

Entry Detail

PDB ID:

5YC6

Keywords:

HYDROLASE/HYDROLASE INHIBITOR

Title:

The crystal structure of uPA in complex with 4-Bromobenzylamirne at pH4.6

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Komagataella pastoris

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.18 Å

R-Value Free:

0.22

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

H 3

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Urokinase-type plasminogen activator
Gene (Uniprot):PLAU
Chain IDs:A (auth: U)
Chain Length:246
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P00749 Pfam ID:PF00089 EC:3.4.21.73

Ligand Molecules

PGE

PZH

SO4

Primary Citation

Halogen bonding for the design of inhibitors by targeting the S1 pocket of serine proteases

Jiang, L.G, Zhang, X, Zhou, Y, Chen, Y.Y, Luo, Z.P, Li, J.Y, Yuan, C, Huang, M.D.Show

Rsc Adv 8 28189 28197 (2018)

DOI: 10.1039/c8ra03145b

Primary Citation of related structures