5Y9O image
Deposition Date 2017-08-26
Release Date 2018-05-16
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5Y9O
Title:
The apo structure of Legionella pneumophila WipA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.55 Å
R-Value Free:
0.28
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:WipA
Gene (Uniprot):wipA
Chain IDs:A, B
Chain Length:412
Number of Molecules:2
Biological Source:Legionella pneumophila
Ligand Molecules
Primary Citation
Legionella pneumophila effector WipA, a bacterial PPP protein phosphatase with PTP activity
Acta Biochim. Biophys. Sin. (Shanghai) 50 547 554 (2018)
PMID: 29701815 DOI: 10.1093/abbs/gmy042

Abstact

The gram-negative bacterium Legionella pneumophila invades human's lung and causes Legionnaires' disease. To benefit its survival and replication in cellular milieu, L. pneumophila secrets at least 330 effector proteins into host cells. We found that the effector WipA has the protein tyrosine phosphatase (PTP) activity but does not depend on the classical CX5R motif for activity, suggesting that WipA is an unconventional PTP. Meanwhile, the presence of three other highly conserved motifs typically seen in protein serine/threonine phosphatases and the poor inhibition of WipA activity by okadaic acid led us to propose that WipA is a bacterial protein phosphatase. In addition, the determination of the 2.55-Å crystal structure of WipA revealed that WipA resembles cold-active protein tyrosine phosphatase (CAPTPase), and therefore very likely shares the same catalytic mechanism.

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Protein

Chemical

Disease

Primary Citation of related structures
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