5Y7T image
Entry Detail
PDB ID:
5Y7T
Keywords:
Title:
Quaternary complex of AsqJ-Fe3+-2OG-D-cyclopeptin
Biological Source:
PDB Version:
Deposition Date:
2017-08-18
Release Date:
2018-01-24
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Iron/alpha-ketoglutarate-dependent dioxygenase asqJ
Chain IDs:A (auth: B)
Chain Length:315
Number of Molecules:1
Biological Source:Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Primary Citation
Insights into the Desaturation of Cyclopeptin and its C3 Epimer Catalyzed by a non-Heme Iron Enzyme: Structural Characterization and Mechanism Elucidation.
Angew. Chem. Int. Ed. Engl. 57 1831 1835 (2018)
PMID: 29314482 DOI: 10.1002/anie.201710567

Abstact

AsqJ, an iron(II)- and 2-oxoglutarate-dependent enzyme found in viridicatin-type alkaloid biosynthetic pathways, catalyzes sequential desaturation and epoxidation to produce cyclopenins. Crystal structures of AsqJ bound to cyclopeptin and its C3 epimer are reported. Meanwhile, a detailed mechanistic study was carried out to decipher the desaturation mechanism. These findings suggest that a pathway involving hydrogen atom abstraction at the C10 position of the substrate by a short-lived FeIV -oxo species and the subsequent formation of a carbocation or a hydroxylated intermediate is preferred during AsqJ-catalyzed desaturation.

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