5Y63 image
Entry Detail
PDB ID:
5Y63
Keywords:
Title:
Crystal structure of Enterococcus faecalis AhpC
Biological Source:
PDB Version:
Deposition Date:
2017-08-10
Release Date:
2017-12-27
Method Details:
Experimental Method:
Resolution:
2.87 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Alkyl hydroperoxide reductase, C subunit
Chain IDs:A, B, C, D, E
Chain Length:183
Number of Molecules:5
Biological Source:Enterococcus faecalis (strain ATCC 700802 / V583)
Primary Citation
Atomic structure and enzymatic insights into the vancomycin-resistant Enterococcus faecalis (V583) alkylhydroperoxide reductase subunit C
Free Radic. Biol. Med. 115 252 265 (2017)
PMID: 29223533 DOI: 10.1016/j.freeradbiomed.2017.12.003

Abstact

The Enterococcus faecalis alkyl hydroperoxide reductase complex (AhpR) with its subunits AhpC (EfAhpC) and AhpF (EfAhpF) are of paramount importance to restore redox homeostasis. Recently, the novel phenomenon of swapping of the catalytic domains of EfAhpF was uncovered. Here, we visualized its counterpart EfAhpC (187 residues) from the vancomycin-resistant E. faecalis (V583) bacterium by electron microscopy and demonstrate, that in contrast to other bacterial AhpCs, EfAhpC forms a stable decamer-ring irrespective of the redox state. The first crystallographic structure (2.8Å resolution) of the C-terminal truncated form (EfAhpC1-172) confirms the decamer ring and provides new insight into a transition state in-between a fully folded to a locally unfolded conformation in the catalytic center due to redox modulation. Amino acid substitutions of residues in the N- and C-termini as well as the oligomeric interphase of EfAhpC provide information into their structural and enzymatic roles. Mutagenesis, enzymatic and biophysical studies reveal the effect of the unusual existence of four cysteines in EfAhpC, which might optimize the functional adaptation of the E. faecalis enzyme under various physiological conditions.

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