5Y2L image
Deposition Date 2017-07-26
Release Date 2019-01-30
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5Y2L
Keywords:
ANTIMICROBIAL PROTEIN
Title:
Crystal structure of a group 2 HA binding antibody AF4H1K1 Fab in complex with the 1968 H3N2 pandemic (H3-AC/68) hemagglutinin
Biological Source:
Source Organism:
Influenza A virus (strain A/Aichi/2/1968 H3N2) (Taxon ID: 387139)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Trichoplusia ni
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.90 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
H 3 2
5Y2L validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Gene (Uniprot):HA
Chain IDs:A
Chain Length:329
Number of Molecules:1
Biological Source:Influenza A virus (strain A/Aichi/2/1968 H3N2)
UniProt ID:P03437 Pfam ID:PF00509
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Gene (Uniprot):HA
Chain IDs:B
Chain Length:176
Number of Molecules:1
Biological Source:Influenza A virus (strain A/Aichi/2/1968 H3N2)
UniProt ID:P03437 Pfam ID:PF00509
Polymer Type:polypeptide(L)
Molecule:a group 2 HA binding antibody AF4H1K1 Fab heavy chain
Chain IDs:C (auth: I)
Chain Length:233
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:a group 2 HA binding antibody AF4H1K1 Fab light chain
Chain IDs:D (auth: J)
Chain Length:220
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
NAG
Primary Citation
An H3-clade neutralizing antibody screened from an H7N9 patient that binds group 2 influenza A hemagglutinins
To Be Published ? ? ? (?)
Primary Citation of related structures
5Y2L