5XZ3 image
Deposition Date 2017-07-11
Release Date 2018-07-18
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5XZ3
Keywords:
Title:
The X-ray structure of Apis mellifera PGRP-SA
Biological Source:
Source Organism:
Apis mellifera (Taxon ID: 7460)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Peptidoglycan-recognition protein
Chain IDs:A, B, C, D
Chain Length:173
Number of Molecules:4
Biological Source:Apis mellifera
Ligand Molecules
Primary Citation
Crystal structure of peptidoglycan recognition protein SA in Apis mellifera (Hymenoptera: Apidae).
Protein Sci. 27 893 897 (2018)
PMID: 29396863 DOI: 10.1002/pro.3383

Abstact

Peptidoglycan recognition protein SA (PGRP-SA) is a key pattern recognition receptor in the insect innate immune system. PGRP-SA can bind to bacterial PGN and activate the Toll pathway, which triggers the expression and release of antimicrobial peptides to prevent bacterial infection. Here, we report the first structure of Apis mellifera PGRP-SA from Hymenoptera at 1.86 Å resolution. The overall architecture of Am-PGRP-SA was similar to the Drosophila PGRP-SA; however, the residues involved in PGN binding groove were not conserved, and the binding pocket was narrower. This structure gives insight into PGN binding characteristics in honeybees.

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Chemical

Disease

Primary Citation of related structures
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