5XXV image
Deposition Date 2017-07-05
Release Date 2016-09-28
Last Version Date 2025-04-09
Entry Detail
PDB ID:
5XXV
Title:
GDP-microtubule complexed with KIF5C in AMPPNP state
Biological Source:
Source Organism:
Sus scrofa (Taxon ID: 9823)
Method Details:
Experimental Method:
Resolution:
6.46 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Tubulin alpha-1A chain
Gene (Uniprot):TUBA1A
Chain IDs:A, C, E, G, I, K, M, O, Q
Chain Length:438
Number of Molecules:9
Biological Source:Sus scrofa
Polymer Type:polypeptide(L)
Molecule:Tubulin beta chain
Chain IDs:B, D, F, H, J, L, N, P, R
Chain Length:426
Number of Molecules:9
Biological Source:Sus scrofa
Primary Citation
Kinesin-binding-triggered conformation switching of microtubules contributes to polarized transport
J. Cell Biol. 217 4164 4183 (2018)
PMID: 30297389 DOI: 10.1083/jcb.201711178

Abstact

Kinesin-1, the founding member of the kinesin superfamily of proteins, is known to use only a subset of microtubules for transport in living cells. This biased use of microtubules is proposed as the guidance cue for polarized transport in neurons, but the underlying mechanisms are still poorly understood. Here, we report that kinesin-1 binding changes the microtubule lattice and promotes further kinesin-1 binding. This high-affinity state requires the binding of kinesin-1 in the nucleotide-free state. Microtubules return to the initial low-affinity state by washing out the binding kinesin-1 or by the binding of non-hydrolyzable ATP analogue AMPPNP to kinesin-1. X-ray fiber diffraction, fluorescence speckle microscopy, and second-harmonic generation microscopy, as well as cryo-EM, collectively demonstrated that the binding of nucleotide-free kinesin-1 to GDP microtubules changes the conformation of the GDP microtubule to a conformation resembling the GTP microtubule.

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Primary Citation of related structures