5XVQ image
Deposition Date 2017-06-28
Release Date 2017-08-02
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5XVQ
Keywords:
Title:
Crystal structure of monkey Nicotinamide N-methyltransferase (NNMT) bound with end product, 1-methyl Nicotinamide (MNA)
Biological Source:
Source Organism:
Macaca mulatta (Taxon ID: 9544)
Method Details:
Experimental Method:
Resolution:
2.29 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Nicotinamide N-methyltransferase (NNMT)
Gene (Uniprot):NNMT
Chain IDs:A, B
Chain Length:284
Number of Molecules:2
Biological Source:Macaca mulatta
Primary Citation
Crystal structures of monkey and mouse nicotinamide N-methyltransferase (NNMT) bound with end product, 1-methyl nicotinamide
Biochem. Biophys. Res. Commun. 491 416 422 (2017)
PMID: 28720493 DOI: 10.1016/j.bbrc.2017.07.087

Abstact

Nicotinamide N-methyltransferase (NNMT) is a S-adenosyl-l-methionine (SAM)-dependent enzyme that catalyzes N-methylation of nicotinamide (NA) and other pyridines to form N-methyl pyridinium ions. Here we report the first ternary complex X-ray crystal structures of monkey NNMT and mouse NNMT in bound form with the primary endogenous product, 1-methyl nicotinamide (MNA) and demethylated cofactor, S-adenosyl-homocysteine (SAH) determined at 2.30 Å and 1.88 Å respectively. The structural fold of these enzymes is identical to human NNMT. It is known that the primary endogenous product catalyzed by NNMT, MNA is a specific inhibitor of NNMT. Our data clearly indicates that the MNA binds to the active site and it would be trapped in the active site due to the formation of the bridge between the pole (long helix, α3) and long C-terminal loop. This might explain the mechanism of MNA acting as a feedback inhibitor of NNMT.

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