5XUQ image
Deposition Date 2017-06-24
Release Date 2018-06-27
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5XUQ
Keywords:
TRANSCRIPTION
Title:
Crystal structure of VDR-LBD complexed with an antagonist, 2-methylidene-19,26,27-trinor-22-(S)-butyl-1-hydroxy-25-oxo-25-(1H-pyrrol-2-yl)- vitamin D3
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.80 Å
R-Value Free:
0.19
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
C 1 2 1
5XUQ validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Vitamin D3 receptor
Gene (Uniprot):Vdr
Mutations:deletion 165-211
Chain IDs:A
Chain Length:271
Number of Molecules:1
Biological Source:Rattus norvegicus
UniProt ID:P13053 Pfam ID:PF00104
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mediator of RNA polymerase II transcription subunit 1
Gene (Uniprot):MED1
Chain IDs:B (auth: C)
Chain Length:13
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q15648
Ligand Molecules
8FF
Primary Citation
Discovery of Potent Vitamin D Receptor Antagonist
To Be Published ? ? ? (?)
Primary Citation of related structures
5XUQ