5XSK image
Deposition Date 2017-06-14
Release Date 2018-06-20
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5XSK
Keywords:
HORMONE
Title:
Crystal structure of PWWP-DNA complex for human hepatoma-derived growth factor
Biological Source:
Source Organism:
Escherichia coli BL21 (Taxon ID: 511693)
Rattus norvegicus (Taxon ID: 10116)
Host Organism:
Escherichia coli BL21
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.84 Å
R-Value Free:
0.26
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 31
5XSK validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hepatoma-derived growth factor
Gene (Uniprot):Hdgf
Chain IDs:C (auth: A), D (auth: B)
Chain Length:120
Number of Molecules:2
Biological Source:Rattus norvegicus
UniProt ID:Q8VHK7 Pfam ID:PF00855
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*TP*TP*CP*AP*AP*GP*AP*CP*CP*A)-3')
Chain IDs:A (auth: D)
Chain Length:10
Number of Molecules:1
Biological Source:Escherichia coli BL21
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*TP*GP*GP*TP*CP*TP*TP*GP*AP*A)-3')
Chain IDs:B (auth: F)
Chain Length:10
Number of Molecules:1
Biological Source:Escherichia coli BL21
Ligand Molecules
MPD
Primary Citation
Structure of PWWP-DNA complex at 2.84 Angstroms resolution
To Be Published ? ? ? (?)
Primary Citation of related structures
5XSK