5XOM image
Deposition Date 2017-05-29
Release Date 2018-04-11
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5XOM
Keywords:
Title:
Hydra Fam20
Biological Source:
Source Organism:
Hydra vulgaris (Taxon ID: 6087)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glycosaminoglycan xylosylkinase
Gene (Uniprot):FAM20B
Chain IDs:A, B
Chain Length:393
Number of Molecules:2
Biological Source:Hydra vulgaris
Ligand Molecules
Primary Citation
Structure and evolution of the Fam20 kinases
Nat Commun 9 1218 1218 (2018)
PMID: 29572475 DOI: 10.1038/s41467-018-03615-z

Abstact

The Fam20 proteins are novel kinases that phosphorylate secreted proteins and proteoglycans. Fam20C phosphorylates hundreds of secreted proteins and is activated by the pseudokinase Fam20A. Fam20B phosphorylates a xylose residue to regulate proteoglycan synthesis. Despite these wide-ranging and important functions, the molecular and structural basis for the regulation and substrate specificity of these kinases are unknown. Here we report molecular characterizations of all three Fam20 kinases, and show that Fam20C is activated by the formation of an evolutionarily conserved homodimer or heterodimer with Fam20A. Fam20B has a unique active site for recognizing Galβ1-4Xylβ1, the initiator disaccharide within the tetrasaccharide linker region of proteoglycans. We further show that in animals the monomeric Fam20B preceded the appearance of the dimeric Fam20C, and the dimerization trait of Fam20C emerged concomitantly with a change in substrate specificity. Our results provide comprehensive structural, biochemical, and evolutionary insights into the function of the Fam20 kinases.

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