5XNV image
Deposition Date 2017-05-24
Release Date 2017-11-01
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5XNV
Title:
Crystal structure of YEATS2 YEATS bound to H3K27ac peptide
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
I 4 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:YEATS domain-containing protein 2
Gene (Uniprot):YEATS2
Chain IDs:A
Chain Length:133
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:ALA-ALA-ARG-ALY-SER-ALA-PRO-ALA
Chain IDs:B
Chain Length:8
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer.
Nat Commun 8 1088 1088 (2017)
PMID: 29057918 DOI: 10.1038/s41467-017-01173-4

Abstact

Recognition of modified histones by "reader" proteins constitutes a key mechanism regulating diverse chromatin-associated processes important for normal and neoplastic development. We recently identified the YEATS domain as a novel acetyllysine-binding module; however, the functional importance of YEATS domain-containing proteins in human cancer remains largely unknown. Here, we show that the YEATS2 gene is highly amplified in human non-small cell lung cancer (NSCLC) and is required for cancer cell growth and survival. YEATS2 binds to acetylated histone H3 via its YEATS domain. The YEATS2-containing ATAC complex co-localizes with H3K27 acetylation (H3K27ac) on the promoters of actively transcribed genes. Depletion of YEATS2 or disruption of the interaction between its YEATS domain and acetylated histones reduces the ATAC complex-dependent promoter H3K9ac levels and deactivates the expression of essential genes. Taken together, our study identifies YEATS2 as a histone H3K27ac reader that regulates a transcriptional program essential for NSCLC tumorigenesis.

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Primary Citation of related structures