5XCB image
Entry Detail
PDB ID:
5XCB
Title:
X-ray structure of domains D1 and D2 of Clostridium perfringens pili protein CppA
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2017-03-22
Release Date:
2018-02-28
Method Details:
Experimental Method:
Resolution:
2.14 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Probable surface protein
Chain IDs:A
Chain Length:325
Number of Molecules:1
Biological Source:Clostridium perfringens str. 13
Primary Citation
Structures of major pilins in Clostridium perfringens demonstrate dynamic conformational change.
Acta Crystallogr D Struct Biol 75 718 732 (2019)
PMID: 31373571 DOI: 10.1107/S2059798319009689

Abstact

Pili in Gram-positive bacteria are flexible rod proteins associated with the bacterial cell surface, and they play important roles in the initial adhesion to host tissues and colonization. The pilus shaft is formed by the covalent polymerization of major pilins, catalyzed by sortases, a family of cysteine transpeptidases. Here, X-ray structures of the major pilins from Clostridium perfringens strains 13 and SM101 and of sortase from strain SM101 are presented with biochemical analysis to detect the formation of pili in vivo. The major pilin from strain 13 adopts an elongated structure to form noncovalently linked polymeric chains in the crystal, yielding a practical model of the pilus fiber structure. The major pilin from strain SM101 adopts a novel bent structure and associates to form a left-handed twist like an antiparallel double helix in the crystal, which is likely to promote bacterial cell-cell interactions. A modeling study showed that pilin with a bent structure interacts favorably with sortase. The major pilin from strain SM101 was considered to be in an equilibrium state between an elongated and a bent structure through dynamic conformational change, which may be involved in pili-mediated colonization and sortase-mediated polymerization of pili.

Legend

Protein

Chemical

Disease

Primary Citation of related structures