ISDA

Deposition Date 2017-02-23

Release Date 2018-02-28

Last Version Date 2023-11-22

Entry Detail

PDB ID:

5X6Y

Keywords:

TRANSFERASE

Title:

Crystal structure of Rice Dwarf Virus P5 in complex with S-adenosylmethionine

Biological Source:

Source Organism:

Rice dwarf virus (isolate O) (Taxon ID: 142805)

Host Organism:

Spodoptera frugiperda

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.10 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:mRNA capping enzyme P5
Chain IDs:A, B, C, D
Chain Length:804
Number of Molecules:4
Biological Source:Rice dwarf virus (isolate O)

UniProt ID:P14583

Ligand Molecules

EDO

FLC

SAM

Primary Citation

Crystal structure of the capping enzyme P5 from Rice Dwarf Virus

Nakamichi, Y, Higashiura, A, Narita, H, Hagiwara, K, Uehara-Ichiki, T, Omura, T, Nakagawa, A.Show

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Primary Citation of related structures