5X3E image
Deposition Date 2017-02-04
Release Date 2017-04-19
Last Version Date 2024-03-27
Entry Detail
PDB ID:
5X3E
Keywords:
Title:
kinesin 6
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.61 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 6
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Kinesin-like protein
Gene (Uniprot):zen-4
Chain IDs:A, B
Chain Length:449
Number of Molecules:2
Biological Source:Caenorhabditis elegans
Primary Citation
Crystal structure of Zen4 in the apo state reveals a missing conformation of kinesin
Nat Commun 8 14951 14951 (2017)
PMID: 28393873 DOI: 10.1038/ncomms14951

Abstact

Kinesins hydrolyse ATP to transport intracellular cargoes along microtubules. Kinesin neck linker (NL) functions as the central mechano-chemical coupling element by changing its conformation through the ATPase cycle. Here we report the crystal structure of kinesin-6 Zen4 in a nucleotide-free, apo state, with the NL initial segment (NIS) adopting a backward-docked conformation and the preceding α6 helix partially melted. Single-molecule fluorescence resonance energy transfer (smFRET) analyses indicate the NIS of kinesin-1 undergoes similar conformational changes under tension in the two-head bound (2HB) state, whereas it is largely disordered without tension. The backward-docked structure of NIS is essential for motility of the motor. Our findings reveal a key missing conformation of kinesins, which provides the structural basis of the stable 2HB state and offers a tension-based rationale for an optimal NL length to ensure processivity of the motor.

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