5X2O image
Entry Detail
PDB ID:
5X2O
Title:
Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-arginine
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2017-02-02
Release Date:
2017-05-24
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.27
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Taste receptor, type 1, member 2a
Chain IDs:A, C
Chain Length:461
Number of Molecules:2
Biological Source:Oryzias latipes
Polymer Type:polypeptide(L)
Description:Taste receptor, type 1, member 3
Chain IDs:B, D
Chain Length:478
Number of Molecules:2
Biological Source:Oryzias latipes
Polymer Type:polypeptide(L)
Description:Fab16A Heavy chain
Chain IDs:E (auth: H), G (auth: J)
Chain Length:225
Number of Molecules:2
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab16A Light chain
Chain IDs:F (auth: L), H (auth: K)
Chain Length:217
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
Structural basis for perception of diverse chemical substances by T1r taste receptors
Nat Commun 8 15530 15530 (2017)
PMID: 28534491 DOI: 10.1038/ncomms15530

Abstact

The taste receptor type 1 (T1r) family perceives 'palatable' tastes. These receptors function as T1r2-T1r3 and T1r1-T1r3 heterodimers to recognize a wide array of sweet and umami (savory) tastes in sugars and amino acids. Nonetheless, it is unclear how diverse tastes are recognized by so few receptors. Here we present crystal structures of the extracellular ligand-binding domains (LBDs), the taste recognition regions of the fish T1r2-T1r3 heterodimer, bound to different amino acids. The ligand-binding pocket in T1r2LBD is rich in aromatic residues, spacious and accommodates hydrated percepts. Biophysical studies show that this binding site is characterized by a broad yet discriminating chemical recognition, contributing for the particular trait of taste perception. In contrast, the analogous pocket in T1r3LBD is occupied by a rather loosely bound amino acid, suggesting that the T1r3 has an auxiliary role. Overall, we provide a structural basis for understanding the chemical perception of taste receptors.

Legend

Protein

Chemical

Disease

Primary Citation of related structures