5WYG image
Deposition Date 2017-01-13
Release Date 2017-04-12
Last Version Date 2023-11-22
Entry Detail
PDB ID:
5WYG
Keywords:
Title:
The crystal structure of the apo form of Mtb MazF
Biological Source:
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.36 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 65
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Probable endoribonuclease MazF7
Gene (Uniprot):mazF7
Chain IDs:A, B (auth: C)
Chain Length:140
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Primary Citation
Structure of the MazF-mt9 toxin, a tRNA-specific endonuclease from Mycobacterium tuberculosis
Biochem. Biophys. Res. Commun. 486 804 810 (2017)
PMID: 28351618 DOI: 10.1016/j.bbrc.2017.03.132

Abstact

Tuberculosis (TB) is a severe disease caused by Mycobacterium tuberculosis (M. tb) and the well-characterized M. tb MazE/F proteins play important roles in stress adaptation. Recently, the MazF-mt9 toxin has been found to display endonuclease activities towards tRNAs but the mechanism is unknown. We hereby present the crystal structure of apo-MazF-mt9. The enzyme recognizes tRNALys with a central UUU motif within the anticodon loop, but is insensitive to the sequence context outside of the loop. Based on our crystallographic and biochemical studies, we identified key residues for catalysis and proposed the potential tRNA-binding site.

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Primary Citation of related structures
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