5WLW image
Deposition Date 2017-07-27
Release Date 2017-11-15
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5WLW
Keywords:
Title:
Crystal Structure of the Human Mitochondrial Cysteine Desulfurase with active Cysteine Loop within ISCU1 active site, coordinating Zn ion. Complexed with human ISD11 and E. coli ACP1 at 3.3A.
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.32 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Cysteine desulfurase, mitochondrial
Gene (Uniprot):NFS1
Chain IDs:A, E
Chain Length:406
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LYR motif-containing protein 4
Gene (Uniprot):LYRM4
Chain IDs:B, F
Chain Length:91
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Acyl carrier protein
Chain IDs:C, G
Chain Length:77
Number of Molecules:2
Biological Source:Escherichia coli O45:K1 (strain S88 / ExPEC)
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Iron-sulfur cluster assembly enzyme ISCU, mitochondrial
Gene (Uniprot):ISCU
Chain IDs:D, H
Chain Length:150
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Structure and functional dynamics of the mitochondrial Fe/S cluster synthesis complex.
Nat Commun 8 1287 1287 (2017)
PMID: 29097656 DOI: 10.1038/s41467-017-01497-1

Abstact

Iron-sulfur (Fe/S) clusters are essential protein cofactors crucial for many cellular functions including DNA maintenance, protein translation, and energy conversion. De novo Fe/S cluster synthesis occurs on the mitochondrial scaffold protein ISCU and requires cysteine desulfurase NFS1, ferredoxin, frataxin, and the small factors ISD11 and ACP (acyl carrier protein). Both the mechanism of Fe/S cluster synthesis and function of ISD11-ACP are poorly understood. Here, we present crystal structures of three different NFS1-ISD11-ACP complexes with and without ISCU, and we use SAXS analyses to define the 3D architecture of the complete mitochondrial Fe/S cluster biosynthetic complex. Our structural and biochemical studies provide mechanistic insights into Fe/S cluster synthesis at the catalytic center defined by the active-site Cys of NFS1 and conserved Cys, Asp, and His residues of ISCU. We assign specific regulatory rather than catalytic roles to ISD11-ACP that link Fe/S cluster synthesis with mitochondrial lipid synthesis and cellular energy status.

Legend

Protein

Chemical

Disease

Primary Citation of related structures