ISDA

Entry Detail

PDB ID:

5WJR

Keywords:

HYDROLASE

Title:

High resolution native hexamer DNA and RNA hybrid in complex with RNase H catalytic domain D132N mutant

Biological Source:

Source Organism:

Bacillus halodurans, synthetic construct

Host Organism:

Escherichia coli K-12

PDB Version:

Deposition Date:

2017-07-24

Release Date:

2017-08-09

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.23

R-Value Work:

0.18

R-Value Observed:

0.19

Space Group:

C 1 2 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Description:Ribonuclease H
Mutations:D132N
Chain IDs:C (auth: A)
Chain Length:142
Number of Molecules:1
Biological Source:Bacillus halodurans

UniProt ID:Q9KEI9 EC:3.1.13.2

Polymer Type:polyribonucleotide
Description:RNA (5'-R(*UP*CP*GP*AP*CP*A)-3')
Chain IDs:A (auth: B)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Description:DNA (5'-D(*AP*TP*GP*TP*CP*G)-3')
Chain IDs:B (auth: C)
Chain Length:6
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules

Primary Citation

Synthesis of Pyrimidine Modified Seleno-DNA as a Novel Approach to Antisense Candidate

Fang, Z, Dantsu, Y, Chen, C, Zhang, W, Huang, Z.Show

Chemistryselect 8 ? ? (2023)

DOI: 10.1002/slct.202302253

Primary Citation of related structures