5W7G image
Deposition Date 2017-06-19
Release Date 2017-07-19
Last Version Date 2024-03-13
Entry Detail
PDB ID:
5W7G
Keywords:
Title:
An envelope of a filamentous hyperthermophilic virus carries lipids in a horseshoe conformation
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ORF140
Gene (Uniprot):ORF140
Chain IDs:A, C, E, G, I, K, M, O, Q, S, U, W, Y, AA (auth: a), CA (auth: c), EA (auth: e), GA (auth: g), IA (auth: i), KA (auth: k), MA (auth: m), OA (auth: o)
Chain Length:140
Number of Molecules:21
Biological Source:Acidianus filamentous virus 1
Polymer Type:polypeptide(L)
Molecule:ORF132
Gene (Uniprot):ORF132
Chain IDs:B, D, F, H, J, L, N, P, R, T, V, X, Z, BA (auth: b), DA (auth: d), FA (auth: f), HA (auth: h), JA (auth: j), LA (auth: l), NA (auth: n), PA (auth: p)
Chain Length:132
Number of Molecules:21
Biological Source:Acidianus filamentous virus 1
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (253-MER)
Chain IDs:QA (auth: q), RA (auth: r)
Chain Length:140
Number of Molecules:2
Biological Source:Acidianus filamentous virus 1
Ligand Molecules
Primary Citation
Model for a novel membrane envelope in a filamentous hyperthermophilic virus.
Elife 6 ? ? (2017)
PMID: 28639939 DOI: 10.7554/eLife.26268

Abstact

Biological membranes create compartments, and are usually formed by lipid bilayers. However, in hyperthermophilic archaea that live optimally at temperatures above 80°C the membranes are monolayers which resemble fused bilayers. Many double-stranded DNA viruses which parasitize such hosts, including the filamentous virus AFV1 of Acidianus hospitalis, are enveloped with a lipid-containing membrane. Using cryo-EM, we show that the membrane in AFV1 is a ~2 nm-thick monolayer, approximately half the expected membrane thickness, formed by host membrane-derived lipids which adopt a U-shaped 'horseshoe' conformation. We hypothesize that this unusual viral envelope structure results from the extreme curvature of the viral capsid, as 'horseshoe' lipid conformations favor such curvature and host membrane lipids that permit horseshoe conformations are selectively recruited into the viral envelope. The unusual envelope found in AFV1 also has many implications for biotechnology, since this membrane can survive the most aggressive conditions involving extremes of temperature and pH.

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Primary Citation of related structures