5W5X image
Deposition Date 2017-06-16
Release Date 2018-06-27
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5W5X
Title:
Crystal structure of BAXP168G in complex with an activating antibody
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Rattus norvegicus (Taxon ID: 10116)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Apoptosis regulator BAX
Gene (Uniprot):BAX
Mutations:C62S C126S P168G
Chain IDs:C (auth: A)
Chain Length:194
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:3C10 Fab' heavy chain
Chain IDs:B (auth: H)
Chain Length:234
Number of Molecules:1
Biological Source:Rattus norvegicus
Polymer Type:polypeptide(L)
Molecule:3C10 Fab' light chain
Chain IDs:A (auth: L)
Chain Length:213
Number of Molecules:1
Biological Source:Rattus norvegicus
Primary Citation
Ensemble Properties of Bax Determine Its Function.
Structure 26 1346 ? (2018)
PMID: 30122452 DOI: 10.1016/j.str.2018.07.006

Abstact

BAX and BAK are essential mediators of intrinsic apoptosis that permeabilize the mitochondrial outer membrane. BAX activation requires its translocation from cytosol to mitochondria where conformational changes cause its oligomerization. To better understand the critical step of translocation, we examined its blockade by mutation near the C terminus (P168G) or by antibody binding near the N terminus. Similarities in the crystal structures of wild-type and BAX P168G but significant other differences suggest that cytosolic BAX exists as an ensemble of conformers, and that the distribution of conformers within the ensemble determines the different functions of wild-type and mutant proteins. We also describe the structure of BAX in complex with an antibody, 3C10, that inhibits cytosolic BAX by limiting exposure of the membrane-associating helix α9, as does the P168G mutation. Our data for both means of BAX inhibition argue for an allosteric model of BAX regulation that derives from properties of the ensemble of conformers.

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Primary Citation of related structures