5W3Y image
Deposition Date 2017-06-08
Release Date 2017-08-09
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5W3Y
Keywords:
Title:
Crystal structure of PopP2 C321A in complex with IP6 and AcCoA
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:PopP2 protein
Gene (Uniprot):popp
Mutations:C253A
Chain IDs:A, B, C, D
Chain Length:352
Number of Molecules:4
Biological Source:Ralstonia solanacearum
Primary Citation
Mechanism of host substrate acetylation by a YopJ family effector.
Nat Plants 3 17115 17115 (2017)
PMID: 28737762 DOI: 10.1038/nplants.2017.115

Abstact

The Yersinia outer protein J (YopJ) family of bacterial effectors depends on a novel acetyltransferase domain to acetylate signalling proteins from plant and animal hosts. However, the underlying mechanism is unclear. Here, we report the crystal structures of PopP2, a YopJ effector produced by the plant pathogen Ralstonia solanacearum, in complex with inositol hexaphosphate (InsP6), acetyl-coenzyme A (AcCoA) and/or substrate Resistance to Ralstonia solanacearum 1 (RRS1-R)WRKY. PopP2 recognizes the WRKYGQK motif of RRS1-RWRKY to position a targeted lysine in the active site for acetylation. Importantly, the PopP2-RRS1-RWRKY association is allosterically regulated by InsP6 binding, suggesting a previously unidentified role of the eukaryote-specific cofactor in substrate interaction. Furthermore, we provide evidence for the reaction intermediate of PopP2-mediated acetylation, an acetyl-cysteine covalent adduct, lending direct support to the 'ping-pong'-like catalytic mechanism proposed for YopJ effectors. Our study provides critical mechanistic insights into the virulence activity of YopJ class of acetyltransferases.

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Primary Citation of related structures