5W23 image
Entry Detail
PDB ID:
5W23
Title:
Crystal Structure of RSV F in complex with 5C4 Fab
Biological Source:
PDB Version:
Deposition Date:
2017-06-05
Release Date:
2017-12-06
Method Details:
Experimental Method:
Resolution:
3.40 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fusion glycoprotein F0
Chain IDs:A, B, C
Chain Length:568
Number of Molecules:3
Biological Source:Human respiratory syncytial virus A
Polymer Type:polypeptide(L)
Description:5C4 Fab heavy chain
Chain IDs:D (auth: H), F (auth: I), H (auth: J)
Chain Length:249
Number of Molecules:3
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:5C4 Fab light chain
Chain IDs:E (auth: L), G (auth: M), I (auth: N)
Chain Length:241
Number of Molecules:3
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Structural basis of respiratory syncytial virus subtype-dependent neutralization by an antibody targeting the fusion glycoprotein.
Nat Commun 8 1877 1877 (2017)
PMID: 29187732 DOI: 10.1038/s41467-017-01858-w

Abstact

A licensed vaccine for respiratory syncytial virus (RSV) is unavailable, and passive prophylaxis with the antibody palivizumab is restricted to high-risk infants. Recently isolated antibodies 5C4 and D25 are substantially more potent than palivizumab, and a derivative of D25 is in clinical trials. Here we show that unlike D25, 5C4 preferentially neutralizes subtype A viruses. The crystal structure of 5C4 bound to the RSV fusion (F) protein reveals that the overall binding mode of 5C4 is similar to that of D25, but their angles of approach are substantially different. Mutagenesis and virological studies demonstrate that RSV F residue 201 is largely responsible for the subtype specificity of 5C4. These results improve our understanding of subtype-specific immunity and the neutralization breadth requirements of next-generation antibodies, and thereby contribute to the design of broadly protective RSV vaccines.

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Primary Citation of related structures