5W0D image
Deposition Date 2017-05-30
Release Date 2018-02-14
Last Version Date 2024-10-16
Entry Detail
PDB ID:
5W0D
Title:
Inferred precursor (UCA) of the human antibody lineage K03.12 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1
Chain IDs:A
Chain Length:223
Number of Molecules:1
Biological Source:Influenza A virus (A/Solomon Islands/3/2006(H1N1))
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lineage K03.12 UCA antibody heavy chain
Chain IDs:B
Chain Length:244
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lineage K03.12 UCA antibody light chain
Gene (Uniprot):IGL@
Chain IDs:C
Chain Length:214
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Memory B Cells that Cross-React with Group 1 and Group 2 Influenza A Viruses Are Abundant in Adult Human Repertoires.
Immunity 48 174 184.e9 (2018)
PMID: 29343437 DOI: 10.1016/j.immuni.2017.12.009

Abstact

Human B cell antigen-receptor (BCR) repertoires reflect repeated exposures to evolving influenza viruses; new exposures update the previously generated B cell memory (Bmem) population. Despite structural similarity of hemagglutinins (HAs) from the two groups of influenza A viruses, cross-reacting antibodies (Abs) are uncommon. We analyzed Bmem compartments in three unrelated, adult donors and found frequent cross-group BCRs, both HA-head directed and non-head directed. Members of a clonal lineage from one donor had a BCR structure similar to that of a previously described Ab, encoded by different gene segments. Comparison showed that both Abs contacted the HA receptor-binding site through long heavy-chain third complementarity determining regions. Affinities of the clonal-lineage BCRs for historical influenza-virus HAs from both group 1 and group 2 viruses suggested that serial responses to seasonal influenza exposures had elicited the lineage and driven affinity maturation. We propose that appropriate immunization regimens might elicit a comparably broad response.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback