5VNE image
Deposition Date 2017-04-30
Release Date 2017-07-05
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5VNE
Title:
Crystal structure of Sec23a/Sec24a/Sec22 complexed with Emp24 sorting motif
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein transport protein Sec23A
Gene (Uniprot):SEC23A
Chain IDs:A
Chain Length:764
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein transport protein Sec24A
Gene (Uniprot):SEC24A
Chain IDs:B
Chain Length:748
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Vesicle-trafficking protein SEC22b
Gene (Uniprot):Sec22b
Chain IDs:C
Chain Length:157
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:EMP24
Chain IDs:D
Chain Length:3
Number of Molecules:1
Biological Source:Moesziomyces aphidis DSM 70725
Ligand Molecules
Primary Citation
ER retention is imposed by COPII protein sorting and attenuated by 4-phenylbutyrate.
Elife 6 ? ? (2017)
PMID: 28594326 DOI: 10.7554/eLife.26624

Abstact

Native cargo proteins exit the endoplasmic reticulum (ER) in COPII-coated vesicles, whereas resident and misfolded proteins are substantially excluded from vesicles by a retention mechanism that remains unresolved. We probed the ER retention process using the proteostasis regulator 4-phenylbutyrate (4-PBA), which we show targets COPII protein to reduce the stringency of retention. 4-PBA competes with p24 proteins to bind COPII. When p24 protein uptake is blocked, COPII vesicles package resident proteins and an ER-trapped mutant LDL receptor. We further show that 4-PBA triggers the secretion of a KDEL-tagged luminal resident, implying that a compromised retention mechanism causes saturation of the KDEL retrieval system. The results indicate that stringent ER retention requires the COPII coat machinery to actively sort biosynthetic cargo from diffusible misfolded and resident ER proteins.

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Primary Citation of related structures