5VMF image
Deposition Date 2017-04-27
Release Date 2017-11-08
Last Version Date 2024-10-23
Entry Detail
PDB ID:
5VMF
Keywords:
Title:
Influenza hemagglutinin H1 mutant DH1D in complex with 6'SLN
Biological Source:
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1
Gene (Uniprot):HA
Chain IDs:A, C, E
Chain Length:326
Number of Molecules:3
Biological Source:Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2
Gene (Uniprot):HA
Chain IDs:B, D, F
Chain Length:191
Number of Molecules:3
Biological Source:Influenza A virus (strain A/Brevig Mission/1/1918 H1N1)
Ligand Molecules
Peptide-like Molecules
PRD_900046
Primary Citation
Determinant of receptor-preference switch in influenza hemagglutinin.
Virology 513 98 107 (2017)
PMID: 29055255 DOI: 10.1016/j.virol.2017.10.010

Abstact

Influenza pandemic occurs when a new strain from other animal species overcomes the inter-species barriers and supports rapid human-to-human transmission. A critical prerequisite to this process is that hemagglutinin (HA) acquires a few key mutations to switch from avian receptors to human receptors. Previous studies suggest that H1 and H2/H3 HAs use different sets of mutations for the switch. This report shows that HA from the 1918 H1N1 pandemic virus (1918H1 HA) adopts the set of mutations used by H2/H3 HAs in receptor-preference switch when its 130-loop is made similar to those of H2/H3 HAs. Thus, the 130-loop appears to be the key determinant for the different mutations employed by pandemic H1 or H2/H3 HA. The correlation of the mutational routes and the 130-loop as unraveled in this study opens the door for efficient investigation of mutations required by other HA subtypes for inter-human airborne transmission.

Legend

Protein

Chemical

Disease

Primary Citation of related structures