5VKG image
Deposition Date 2017-04-21
Release Date 2017-11-15
Last Version Date 2024-10-30
Entry Detail
PDB ID:
5VKG
Title:
Solution-state NMR structural ensemble of human Tsg101 UEV in complex with tenatoprazole
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Tumor susceptibility gene 101 protein
Gene (Uniprot):TSG101
Mutagens:M1G
Chain IDs:A
Chain Length:145
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Tsg101 chaperone function revealed by HIV-1 assembly inhibitors.
Nat Commun 8 1391 1391 (2017)
PMID: 29123089 DOI: 10.1038/s41467-017-01426-2

Abstact

HIV-1 replication requires Tsg101, a component of cellular endosomal sorting complex required for transport (ESCRT) machinery. Tsg101 possesses an ubiquitin (Ub) E2 variant (UEV) domain with a pocket that can bind PT/SAP motifs and another pocket that can bind Ub. The PTAP motif in the viral structural precursor polyprotein, Gag, allows the recruitment of Tsg101 and other ESCRTs to virus assembly sites where they mediate budding. It is not known how or even whether the UEV Ub binding function contributes to virus production. Here, we report that disruption of UEV Ub binding by commonly used drugs arrests assembly at an early step distinct from the late stage involving PTAP binding disruption. NMR reveals that the drugs form a covalent adduct near the Ub-binding pocket leading to the disruption of Ub, but not PTAP binding. We conclude that the Ub-binding pocket has a chaperone function involved in bud initiation.

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Primary Citation of related structures