5VKE image
Deposition Date 2017-04-21
Release Date 2017-12-06
Last Version Date 2024-11-13
Entry Detail
PDB ID:
5VKE
Title:
Open conformation of KcsA deep-inactivated
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.37 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 4
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Antibody Light Chain
Chain IDs:A
Chain Length:219
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:Antibody Heavy Chain
Chain IDs:B
Chain Length:212
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Molecule:pH-gated potassium channel KcsA
Gene (Uniprot):kcsA
Chain IDs:C
Chain Length:96
Number of Molecules:1
Biological Source:Streptomyces lividans
Primary Citation
The gating cycle of a K+ channel at atomic resolution.
Elife 6 ? ? (2017)
PMID: 29165243 DOI: 10.7554/eLife.28032

Abstact

C-type inactivation in potassium channels helps fine-tune long-term channel activity through conformational changes at the selectivity filter. Here, through the use of cross-linked constitutively open constructs, we determined the structures of KcsA's mutants that stabilize the selectivity filter in its conductive (E71A, at 2.25 Å) and deep C-type inactivated (Y82A at 2.4 Å) conformations. These structural snapshots represent KcsA's transient open-conductive (O/O) and the stable open deep C-type inactivated states (O/I), respectively. The present structures provide an unprecedented view of the selectivity filter backbone in its collapsed deep C-type inactivated conformation, highlighting the close interactions with structural waters and the local allosteric interactions that couple activation and inactivation gating. Together with the structures associated with the closed-inactivated state (C/I) and in the well-known closed conductive state (C/O), this work recapitulates, at atomic resolution, the key conformational changes of a potassium channel pore domain as it progresses along its gating cycle.

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Primary Citation of related structures