5VJJ image
Deposition Date 2017-04-19
Release Date 2017-08-30
Last Version Date 2024-03-13
Entry Detail
PDB ID:
5VJJ
Title:
Crystal structure of the flax-rust effector AvrP
Biological Source:
Source Organism:
Melampsora lini (Taxon ID: 5261)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.52 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Avirulence protein AvrP123
Chain IDs:A, B
Chain Length:91
Number of Molecules:2
Biological Source:Melampsora lini
Ligand Molecules
Primary Citation
Crystal structure of the Melampsora lini effector AvrP reveals insights into a possible nuclear function and recognition by the flax disease resistance protein P.
Mol. Plant Pathol. 19 1196 1209 (2018)
PMID: 28817232 DOI: 10.1111/mpp.12597

Abstact

The effector protein AvrP is secreted by the flax rust fungal pathogen (Melampsora lini) and recognized specifically by the flax (Linum usitatissimum) P disease resistance protein, leading to effector-triggered immunity. To investigate the biological function of this effector and the mechanisms of specific recognition by the P resistance protein, we determined the crystal structure of AvrP. The structure reveals an elongated zinc-finger-like structure with a novel interleaved zinc-binding topology. The residues responsible for zinc binding are conserved in AvrP effector variants and mutations of these motifs result in a loss of P-mediated recognition. The first zinc-coordinating region of the structure displays a positively charged surface and shows some limited similarities to nucleic acid-binding and chromatin-associated proteins. We show that the majority of the AvrP protein accumulates in the plant nucleus when transiently expressed in Nicotiana benthamiana cells, suggesting a nuclear pathogenic function. Polymorphic residues in AvrP and its allelic variants map to the protein surface and could be associated with differences in recognition specificity. Several point mutations of residues on the non-conserved surface patch result in a loss of recognition by P, suggesting that these residues are required for recognition.

Legend

Protein

Chemical

Disease

Primary Citation of related structures