5VIM image
Deposition Date 2017-04-17
Release Date 2017-09-06
Last Version Date 2023-10-04
Entry Detail
PDB ID:
5VIM
Keywords:
Title:
Crystal structure of the Zika virus NS5 methyltransferase.
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methyltransferase
Chain IDs:A, B
Chain Length:265
Number of Molecules:2
Biological Source:Zika virus (strain Mr 766)
Primary Citation
Crystal structures of the methyltransferase and helicase from the ZIKA 1947 MR766 Uganda strain.
Acta Crystallogr D Struct Biol 73 767 774 (2017)
PMID: 28876240 DOI: 10.1107/S2059798317010737

Abstact

Two nonstructural proteins encoded by Zika virus strain MR766 RNA, a methyltransferase and a helicase, were crystallized and their structures were solved and refined at 2.10 and 2.01 Å resolution, respectively. The NS5 methyltransferase contains a bound S-adenosyl-L-methionine (SAM) co-substrate. The NS3 helicase is in the apo form. Comparison with published crystal structures of the helicase in the apo, nucleotide-bound and single-stranded RNA (ssRNA)-bound states suggests that binding of ssRNA to the helicase may occur through conformational selection rather than induced fit.

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Primary Citation of related structures