5VHT image
Deposition Date 2017-04-13
Release Date 2017-05-10
Last Version Date 2023-11-15
Entry Detail
PDB ID:
5VHT
Keywords:
Title:
E. coli chorismate mutase with orthogonal interface containing p-benzoyl phenylalanine
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chorismate Mutase
Gene (Uniprot):pheA
Mutations:L25F, Y72PBF, L76T, I80G, D83Y
Chain IDs:A, B
Chain Length:99
Number of Molecules:2
Biological Source:Escherichia coli
Primary Citation
Generation of an Orthogonal Protein-Protein Interface with a Noncanonical Amino Acid.
J. Am. Chem. Soc. 139 5728 5731 (2017)
PMID: 28413876 DOI: 10.1021/jacs.7b02273

Abstact

We have engineered the protein interface of the Escherichia coli chorismate mutase (EcCM) homodimer to be dependent on incorporation of a noncanonical amino acid (ncAA) at residue 72. The large hydrophobic amino acid p-benzoyl phenylalanine (pBzF) was substituted for Tyr72, which led to a catalytically inactive protein. A library of five residues (Leu25', Arg29', Leu76, Ile80' and Asp83') surrounding pBzF72 was generated and subjected to a growth based selection in a chorismate mutase deficient strain. An EcCM variant (Phe25', pBzF72, Thr76, Gly80' and Tyr83') forms a stable homodimer, has catalytic activity similar to the wild type enzyme, and unfolds with a Tm of 53 °C. The X-ray crystal structure reveals a pi-pi stacking and hydrogen bonding interactions that stabilize the new protein interface. The strategy described here should be useful for generating organisms that are dependent on the presence of a ncAA for growth.

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