5V5M image
Deposition Date 2017-03-14
Release Date 2017-06-14
Last Version Date 2024-11-20
Entry Detail
PDB ID:
5V5M
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of HLA-B*5701 complex with HIV-1 gag derived peptide TW10
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Human immunodeficiency virus 1 (Taxon ID: 11676)
Host Organism:
Escherichia coli BL21(DE3)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.88 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 21 21 21
5V5M validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:HLA class I histocompatibility antigen, B-57 alpha chain
Chain IDs:A, C
Chain Length:278
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P01889 Pfam ID:PF00129, PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-2-microglobulin
Gene (Uniprot):B2M
Chain IDs:B, D
Chain Length:99
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:P61769 Pfam ID:PF07654
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TW10
Chain IDs:E, F
Chain Length:10
Number of Molecules:2
Biological Source:Human immunodeficiency virus 1
UniProt ID:P03366
Primary Citation
Crystal structure of HLA-B*5801 with a TW10 HIV Gag epitope reveals a novel mode of peptide presentation.
Cell. Mol. Immunol. 14 631 634 (2017)
PMID: 28552904 DOI: 10.1038/cmi.2017.24
Primary Citation of related structures
5V5L
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